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At2g05100.1/MSA

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>gi|15224471|ref|NP_178585.1|	   265 residues, 50 /line  LHCB2.1 (Photosystem II light harvesting complex gene 2.1); chlorophyll binding [Arabidopsis thaliana]
---MATSAIQQSSFAGQTA--LKPSNELLRKV----------GVSGGGRVTMRRTVK---
--STPQSIWYGPDRPKYLGPFS-ENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEV
IHSRWAMLGALGCTFPEILSK-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSIL
AIWAVQVVLMGFIEGYRIGGGP---LG--EGLDPLYPGGA-FDPLNLAEDPEAFSELKVK
ELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATN------FVPG-N

>gi|115453971|ref|NP_001050586.1|	   263 residues, 50 /line  Os03g0592500 [Oryza sativa (japonica cultivar-group)]
M--AASALHQTTSFLGTAP--RR--DELVRRV----------G-DSGGRITMRRTVK---
--SAPQSIWYGPDRPKYLGPFS-EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEV
IHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSIL
AIWAVQVVLMGFVEGYRVGGGP---LG--EGLDKVYPGGA-FDPLGLADDPDTFAELKVK
ELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATN------FVPG-K

>gi|115793|sp|P27523|CB23_HORVU	   268 residues, 50 /line  Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB)
MAS-TIMAAASRAVVAKTP-FLSGQGRAAS--------------ASPLRDIAAAT--NG-
RITMGNDLWYGPDRVKYLGPFS-AQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEV
IHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSIL
AVLGFQVLLMGLVEGFRINGLDG--VG--EGND-LYPGGQYFDPLGLADDPVTFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATK------FAPG-S

>gi|125558806|gb|EAZ04342.1|	   266 residues, 50 /line  hypothetical protein OsI_025574 [Oryza sativa (indica cultivar-group)]
MAS-TIMAPTSRVLAAKTP-FL-GHPRPSN---------------APLRDIAAAA--TG-
RITMSKELWYGPDRVKYLGPFS-AQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEV
IHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSIL
AVLGFQVVLMGLVEGYRINGLPG--VG--DGND-LYPGGQYFDPLGLADDPVTFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLADPVANNAWVYATK------FTPG-S

>gi|115794|sp|P27489|CB23_SOLLC	   265 residues, 50 /line  Chlorophyll a-b binding protein 13, chloroplast precursor (LHCII type III CAB-13)
MAS-MAATASSTTVVKATP-FL-GQTK--N--------------ANPLRDVVAMG--SA-
RFTMSNDLWYGPDRVKYLGPFS-AQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
IHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSIL
AVLGFQVVLMGLVEGFRINGLPG--VG--EGND-LYPGGQYFDPLGLADDPTTFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATK------FVPG-A

>gi|15239602|ref|NP_200238.1|	   265 residues, 50 /line  LHCB3 (LIGHT-HARVESTING CHLOROPHYLL BINDING PROTEIN 3) [Arabidopsis thaliana]
MAS-TFTSS--SSVLTPTT-FL-GQTKASS--------------FNPLRDVVSLG--SP-
KYTMGNDLWYGPDRVKYLGPFS-VQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEV
IHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSIL
AVLGFQVILMGLVEGFRINGLDG--VG--EGND-LYPGGQYFDPLGLADDPVTFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATK------FAPG-A

>gi|115826|sp|P22686|CB2_CHLMO	   256 residues, 50 /line  Chlorophyll a-b binding protein of LHCII type I, chloroplast precursor (CAB) (LHCP)
MAF-ALISNRALTVKVE-----AAKKAAGT----KQTK-AAP------------------
-AKSAGIEWYGPDRAKWLGPFST-NTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEV
IHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIV
ATLAVQVVLMGLIEGYRVNGGP---AG--EGLDPLYPGES-FDPLGLADDPDTFAELKVK
EIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATK------FTPS-A

>gi|87313235|gb|ABD37914.1|	   254 residues, 50 /line  light-harvesting chlorophyll-a/b binding protein LhcbM9 [Chlamydomonas incerta]
MAF-ALASSRKALSVVA-----ASKKTAPA----KKAA---A------------------
-PKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELEL
IHARWAMLGALGCLTPELLAK-NGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIV
ATLACQVILMGLIEGYRVNGGP---AG--EGLDPLYPGES-FDPLGLADDPDTFAELKVK
ELKNGRLAMFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATK------FTPS-A

>gi|19423285|gb|AAL88456.1|AF479777_1	   256 residues, 50 /line  major light-harvesting complex II protein m10 [Chlamydomonas reinhardtii]
MAF-ALAKSSLAPRCLA-----STVKVEAR----RTVKPASK------------------
-ASTPDSFWYGPERPLFLGAFT-GEPPSYLTGEFPGDYGWDTAGLSADPETFKRYRELEL
IHARWAMLGALGCITPELLAK-SGTQFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIV
ATLAVQVILMGLVEGYRVNGGP---AG--EGLDPLYPGES-FDPLGLADDPDTFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLSNPTVNNAFAFATK------FTPS-A

>gi|115771|sp|P12329|CB21_MAIZE	   262 residues, 50 /line  Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP)
MAA-STMAISSTAMAGTPI-----------KV----------GSFGEGRITMRKTVGKP-
KVAASGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
IHSRWAMLGALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSIL
AIWACQVVLMGAVEGYRIAGGP---LG--EVVDPLYPGGS-FDPLGLADDPEAFAELKVK
ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATN------FVPG-N

>gi|115799|sp|P15195|CB23_POLMU	   265 residues, 50 /line  Chlorophyll a-b binding protein type 1 member F3, chloroplast precursor (Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP)
MAT-ST-AALTSTFSGQQ---LKPVNELSRKV----------GA-GEARVQMMAPKS---
K-APSGSIWYGSDRPLYLGPFS-GSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEV
IHSRWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSIL
AIWACQVILMGAVEGYRVAGGP---LG--EVEDPIYPGGS-FDPLGLADDPEAFAELKVK
ELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATN------FTPG-K

>gi|41529316|dbj|BAD08519.1|	   267 residues, 50 /line  light-harvesting chlorophyll a/b-binding protein 2 [Physcomitrella patens subsp. patens]
MAA-CT-ACASTALAGQSL--LKPVNELSRKV----------GS-SQARVTMRRTVN---
KSAGSDSIWYGADRPKYLGPFS-GETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEV
IHARWAMLGALGCVTPELLAK-SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSIL
AIWACQVILMGAVEGYRVAGGP---LG--EVTDPIYPGGS-FDPLGLADDPDTFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATN------FVPG-N

>gi|349443|gb|AAA60965.1|	   270 residues, 50 /line  light-harvesting chlorophyll a/b binding protein of photosystem II
MATMASAGVASSAFAGQIV--LKPQNEFVG------------GVHGEGRITMRKTASKK-
VVASSGSPWYGPDRVKYLGPFS-GEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
IHSRWAMLGALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSIL
AIWACQVILMGAVEGYRIAGGP---LG--EITDPIYPGGS-FDPLGLADDPDAFAELKVK
ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATN------FVPG-K

>gi|607150|emb|CAA57408.1|	   274 residues, 50 /line  light harvesting chlorophyll a /b-binding protein Lhcb1*2-1 [Picea abies]
---MASCGIGSCAFAGGQISSLKPHNNQLLGVGA--------GVHGEARVTMRKSSTKKV
SASASPSPWYGPDRVLYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
IHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIL
AIWACQVILMGAVEGYRIAGGP---LG--EITDPIYPGGS-FDPLGLADDPDAFAELKVK
ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATN------FVPG-K

>gi|3417451|dbj|BAA32346.1|	   266 residues, 50 /line  light-harvesting chlorophyll a/b-binding protein of photosystem II [Cryptomeria japonica]
-M-AAMAKLSSPAFAGQMV--NGDFARQLRAL------------NVGERVNMRRGAT---
KAPVSSSPWYGPDRVKYLGPFS-GEPPSYLTGEFPVTTGGTPPVCQPDPETFAKNRELEV
IHARWAMLGALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSIL
AIWACQVILMGAVEGYRVAGGP---LG--EITDPLYPGGS-FDPLGLADDPEAFAELKVK
EIKNGRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNNAWAYATN------FVPG-K

>gi|693916|gb|AAA80591.1|	   265 residues, 50 /line  chlorophyll a/b binding protein
MA-AATMALSSPSFAGQAV--KLSPSAS--EI------------SGNGRITMRKAVA---
KSAPSSSPWYGPDRVKYLGPFS-GESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
IHCRWAMLGALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSIL
AIWACQVVLMGAVEGYRIAGGP---LG--EVVDPLYPGGS-FDPLGLAEDPEAFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN------FVPG-K

>gi|20269804|gb|AAM18057.1|AF495473_1	   256 residues, 50 /line  major light-harvesting complex II protein m1 [Chlamydomonas reinhardtii]
MAF-ALAKSSARAAVSRRS--------TVKVEARRTVKPASKA-----------------
--STPDSFWYGPERPLFLGAFT-GEPPSYLTGEFPGDYGWDTAGLSADPETFKRYRELEL
IHARWAMLGALGCIFPELLGSY-GVPFGEAVWFKAGAQIFQEGGLDYLGNPNLVHAQSIL
AILGTQVLLMGAIEGYRVNGGP---LG--EGLDKLYPGGS-FDPLGLADDPDTFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGTNNAFAYATK------FTP--Q

>gi|3928891|gb|AAC79711.1|	   251 residues, 50 /line  chlorophyll a/b binding protein [Acetabularia acetabulum]
MSF-AVQSVLVGA----------TAKTALVK-------GNKRVS----------------
--VQAAVEWYGPDRAKWLGPYSDGAVPSYLTGEFPGDYGWDTAGLSADPETFKKYRETEL
IHARWAMLGALGCVTPEILAKYGGTSFGESVWFRAGAQIFKDGGLDYLGSPALIHAQSIG
AIVISQVILMGLIEGYRVNGGP---AG--EGLDPLYPGES-FDPLGLADDPDTFAELKIK
EIKNGRLAMFSMFGFYVQAIVTGKGPVENWAEHIADPFTANAFSYATK------FTPT-A

>gi|87313205|gb|ABD37899.1|	   249 residues, 50 /line  light-harvesting chlorophyll-a/b binding protein LhcbM2 [Scenedesmus obliquus]
MAF-ALKQAV-------------ATKAAATR-------ATRQVT----------------
---RAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFAGDYGWDTAGLSADPQTFAKYREIEV
IHARWAMLGALGCITPELLAK-NGVPFGEAVWFKAGAQIFQDGGLNYLGNENLVHAQSIL
ATLAVQVLLMGAAESYRANGGAPGGFG--EDLDSLYPGGA-FDPLGLADDPDTLAELKVK
EIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLSDPSGNNAWNYATK------FVPG-N

>gi|87313177|gb|ABD37885.1|	   267 residues, 50 /line  light-harvesting chlorophyll-a/b binding protein LhcbM1 [Mesostigma viride]
MAA-ALASSTFLGAAVVAP----AQKVEAKKINTVVEARRTKSA----------------
---TPDSPFYGPDRVTFLGPFT--DVPSYLTGEYPGDYGWDTVGLSADPETFAAYREIEL
MHARWAMLGTLGCFLPEALEKYSGINFGESVWFKAGGQIFQEGGLDYLGNPSLVHAQSII
ATVFIQALLMGLVEGYRVGGGP---LG--EAGDKMYPGGS-FDPLGLGDDPDTLAELKVK
EIKNGRLAMFSMFGYFIQAIVTGKGPVENLDAHLADPFVNNGFAYATSSGLVGLINKS-V

>gi|115831|sp|P15773|CB2_MALDO	   268 residues, 50 /line  Chlorophyll a-b binding protein AB10, chloroplast precursor (LHCII type I CAB-AB10) (LHCP)
MYI-PRLSVSICLHPLLIYKIAKPSKLNPIS-------S---TLIVTAGFTMLKHAA---
--KSKVSSSTCDRRVKYLGPFS-GEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEV
IHSRCAMSAALGCIFPELLSV-MGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSIL
AIWTTKVILMGAVEGYRIARGP---LG--EVTDPLYPG-S-FDSLGLAEDTEAFAELKVK
ELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTN------FVPG-N

>gi|19749357|gb|AAD03732.2|	   268 residues, 50 /line  light harvesting complex II protein precursor [Chlamydomonas reinhardtii]
--M-MLSRTVVNVQAKLTKKGGAPKKAAPAS-------AQKKTIREKAGW--WSNGG---
--NEKLSAFYGPDRGLWLGPLS-GTTPAYLTGEFPGDYGWDSAGLSADPETFKRYRELEL
IHARWAMLGALGCITPELLAK-NGTPIVEPVWFKAGAQIFAEGGLDYLGNPGLVHAQSIL
ATLAVQVILMGAIEGYRVNGGP---AG--EGLDKLHPGGQFFDPLGLAEDPDAFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPLANLDEHLASPFTSNAFTYAQK------FTP--Q

>gi|2407314|gb|AAB70556.1|	   251 residues, 50 /line  chlorophyll a/b binding protein [Tetraselmis sp. RG-15]
MAA-VAARSFA--------ATVAGQVGASAR-------GQKQVT----------------
---RAAVEFYGPDRAKWLGPFS-DDTPSYLTGEFPGDYGWDTAGLSADPETFASYRELEL
IHARWAMLGALGCVTPELLSKYAGVEFGEAVWFKAGAQIFADGGLDYLGNSSLVHAQSIL
AILGCQVVLMGGAEAFRVNGGP---LG--EDLDKLHPGGA-FDPLGLADDPDTFSELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPVENWAEHIADPSGSNGFVYATK------FVPG-N

>gi|87313209|gb|ABD37901.1|	   255 residues, 50 /line  light-harvesting chlorophyll-a/b binding protein LhcbM4 [Scenedesmus obliquus]
MAF-AVASRRSSVLVQA---KKGGKAKAPAK-------RAAA--------------A---
--PSKGTEFYGPNRAKWLGPFS-TATPGYLTGEFAGDYGWDTAGLSADPETFRRYRELEL
IHARWAMLGALGCITPELLAK-NGVPFGEAVWFKAGAQIFQEGGLNYLGNSSLIHAQSIL
ATLACQVILMGLVEGYRVNGGP---AG--EGLDPLYPGEA-FDPLGLADDPDTFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLSDPSGNNAWNYATK------FVPG-N

>gi|90191869|gb|ABD91646.1|	   253 residues, 50 /line  major light-harvesting chlorophyll a/b protein  2.1 [Dunaliella salina]
MAA-LIARSGLKA---------LNIRQTRQQ-------RMATV-----------------
--PRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIEL
IHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSII
ATLAVQVVLMGLAEAYRANGGS---EGFLDDLDTLYPGGP-FDPLGLADDPDTFAELKVK
EIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNNAFASATK------FTPG-V

>gi|145079054|tpg|DAA05896.1|	   255 residues, 50 /line  TPA_inf: chloroplast light-harvesting complex II protein precursor Lhcbm13 [Acetabularia acetabulum]
MSV-VSAKTFVGTQVAS-----KKMVTSMRR-------TQKKG-----------------
--SAPDSVWYGPDRPQFLGPFS-GDTPSYLTGEFPGDYGWDTAGLSADPETFRRYRELEL
IHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNANLVHAQSIL
AILGCQVVLMGAIEAYRVNGGP---LG--EGLDPLYPGDK-FDPLGLADDPDTFAELKIK
EIKNGRLAMFSMFGFFVQAVVTGKGPIENWAEHVADPFSVNAWNYATK------FVPGGY

>gi|145079118|tpg|DAA05899.1|	   229 residues, 50 /line  TPA_inf: chloroplast light-harvesting complex II protein precursor Lhcbm9 [Acetabularia acetabulum]
--------------------------------------SVRNV-----------------
--SRNAIEWYGPDRPKWLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFKAYREQEL
IHARWAMLGALGCVTPEILAKYAGVSCGESVWFKAGSQIFQEGGLDYLGNPSLVHAQSIL
AILGCQVVLMGLIEAYRVNGGP---LG--EGLDPLHPGDK-FDPLGLADDPDTFAELKVK
EIKNGRLAMFSMFGFYVQAIVTGKGPIENWADHVADPFNVTAWNYATK------FVP--Q

>gi|145079253|tpg|DAA05906.1|	   220 residues, 50 /line  TPA_inf: chloroplast light-harvesting complex II protein precursor Lhcbm8 [Acetabularia acetabulum]
----------MQTAVVV-----NSAVLAQTK-------SIRNV-----------------
--SRNAVEWYGPDRAKWLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFKAYREQEL
IHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNSNLIHAQSIL
AILGCQVVLMGLIEAYRVNGGP---LG--EGLDPLHPGDK-FDPLGLADDPDTFAELKVK
EIKNGRLAMFSMFGFYVQAIVTGKGPI---------------------------------

>gi|87313227|gb|ABD37910.1|	   246 residues, 50 /line  light-harvesting chlorophyll-a/b binding protein LhcbM2a [Chlamydomonas incerta]
-----IMKSAVRS---------SVRPTVSGR-------SARVV-----------------
--PRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELEL
IHARWAMLGALGCITPELLAK-NGIPFGEAVWFKAGSQIFAEGGLNYLGNENLVHAQSII
ATLAFQVVVMGLAEAYRANGGP---LG--EGLDPLHPGGA-FDPLGLADDPDTFAELKVK
EIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVNAFAYATK------FTPS-A

>gi|125620170|gb|ABN46977.1|	   269 residues, 50 /line  chlorophyll a/b-binding protein [Nelumbo nucifera]
MAASVIMTLSSPSLAGKAL---KLTGFTSKN-------------LGEGGFTMRSTLSRP-
RQSITGGPWYGPDRVKYMGPFS-GQTPSYLTGEFPGDYGWDSAGLSAEPETFAKNRELEV
IHARWAMLGTVGCIVPELLER-NGVKIGEAVWFKAGSQIFRDEGLNYLGDPKLIHAQNIL
AVLAAQVILMGAIEGYRISGGP---LG--EPTDPLYPGGN-FDPLHLADDPEEFAILKVK
EIKNGRLAMFAMLGFYVQAIVTGKGPLENLYDHLADPFKNNAWAFATA------FDPSNS


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