In the plant Arabidopsis thaliana, At1g19350.6 is a gene model for the locus At1g19350.[1]
Also known as BZR2, and BES1, this gene model is classified by TAIR as "BES1 (BRI1-EMS-SUPPRESSOR 1)". It is located on chr1, region 6688832-6690156 FORWARD.
Physiological function[]
At1g19350.6/Function_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ ______________ ________________ (At1g78590) NADK3 (At1g78590) is a NAD(H) kinase with a strong preference for NADH over NAD+. NAD(H) kinases phosphorylate NAD(H) with ATP (other phosphoryl donors are not used preferentially) to form NADP(H). Phosphorylation of NAD(H) is the sole known means of generating NADP(H) de novo.
Tissue expression[]
At1g19350.6/Expression
Subcellular localization[]
At1g19350.6/Localization_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________
NADK3-GFP has been shown by in vivo transient expression to be localized to the cytosol, confirmed by immunoblotting.
Biophysical properties[]
The gene model At1g19350.6 has 335 amino-acid residues and a molecular weight Mw = 36.491 kDa.
The protein is relatively basic; at the physiological pH 7.4, its net charge is 6.78, or 0.020 per residue._____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ NADK3-GFP has been shown by in vivo transient expression to be localized to the cytosol, confirmed by immunoblotting.
Knockout phenotype[]
At1g19350.6/Knockout
Protein interactions[]
At1g19350.6/Interactions_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ This protein does not interact with calmodulin in the presence or absence of calcium or EGTA. NADK3 has been reported to be phosphorylated in vitro by AtMAPK4. NADK3 forms a homodimer.
Domain structure[]
The gene model At1g19350.6 has 1 recognized domains:
- Domain_0018_0164 DUF822 domain (PF05687, IPR008540) Description: BZR1, transcriptional repressor_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________
NADK3 contains the conserved NAD(H) kinase domain, GSTAAMQSAGG for binding NAD and the upstream GGDGT ATP-binding domain.
Amino-acid sequence[]
>At1g19350.6
MTSDGATSTS
AAAAAAAMAT
RRKPSWRERE
NNRRRERRRR
AVAAKIYTGL
RAQGNYNLPK
HCDNNEVLKA
LCSEAGWVVE
EDGTTYRKGH
KPLPGDMAGS
SSRATPYSSH
NQSPLSSTFD
SPILSYQVSP
SSSSFPSPSR
VGDPHNISTI
FPFLRNGGIP
SSLPPLRISN
SAPVTPPVSS
PTSRNPKPLP
TWESFTKQSM
SMAAKQSMTS
LNYPFYAVSA
PASPTHHRQF
HAPATIPECD
ESDSSTVDSG
HWISFQKFAQ
QQPFSASMVP
TSPTFNLVKP
APQQLSPNTA
AIQEIGQSSE
FKFENSQVKP
WEGERIHDVA
MEDLELTLGN
GKAHS
________________Given the above incorrect annotations, this may, or may not, be the correct sequence for At1g57680.1 _________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________
MAIRKLLLLLKPIDPYPFLQTEGASLIKNPQVLQYLESRCKVHKNAIKFCQEILSKKPVE
WKPISRNDLSHPIRDVDMVITVGGDGTLLHASHFIDDSVPVLGVNSDPTQAHEVEELSDQ
FDASRSTGHLCAATVENFEQVLDDILFGRVVPAKVSRISLKLNSETLLSHALNDILIAQP
CPAAVSRFSFKIKNKDGASSPKTVNCRSSGLRICTAAGSTAAMQSAGGFVMPMLSRDLQF
MVREPISPGSTASLMHSTFKPDQFMDVNWYSDHGTIYIDGCQVQHSVQLGDTIEISSDAP
VLNVFLSHGISQIRSRY-
Multiple sequence alignment[]
A full-length multiple-sequence alignment (MSA) is available here. This MSA may be visualized by submitting it to a server such as ESPript.
Protein structure[]
A predicted structure for this protein is available here.
References[]
- ↑ This is a test reference.