In the plant Arabidopsis thaliana, At1g12240.1 is a gene model for the locus At1g12240.[1]
At1g12240.1/Header
Physiological function[]
At1g12240.1/Function_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ ______________ ________________ (At1g78590) NADK3 (At1g78590) is a NAD(H) kinase with a strong preference for NADH over NAD+. NAD(H) kinases phosphorylate NAD(H) with ATP (other phosphoryl donors are not used preferentially) to form NADP(H). Phosphorylation of NAD(H) is the sole known means of generating NADP(H) de novo.
Tissue expression[]
At1g12240.1/Expression
Subcellular localization[]
At1g12240.1/Localization_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________
NADK3-GFP has been shown by in vivo transient expression to be localized to the cytosol, confirmed by immunoblotting.
Biophysical properties[]
At1g12240.1/Biophysics_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ NADK3-GFP has been shown by in vivo transient expression to be localized to the cytosol, confirmed by immunoblotting.
Knockout phenotype[]
At1g12240.1/Knockout
Protein interactions[]
At1g12240.1/Interactions_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ This protein does not interact with calmodulin in the presence or absence of calcium or EGTA. NADK3 has been reported to be phosphorylated in vitro by AtMAPK4. NADK3 forms a homodimer.
Domain structure[]
At1g12240.1/Domains_____________The entry below does not belong to this gene_________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________ NADK3 contains the conserved NAD(H) kinase domain, GSTAAMQSAGG for binding NAD and the upstream GGDGT ATP-binding domain.
Amino-acid sequence[]
>At1g12240.1
MASSDALLPI
SAREEEPLCP
YTRLPMADPN
QETHGPRRRR
PFKGLLAVSF
GLLFIAFYVA
LIATHDGSRS
NDEGIDETET
ITSRARLAGV
SEKRNDGLWK
LSGDRNTPAF
EWNNSMLSWQ
RTAFHFQPEQ
NWMNDPNGPL
FYKGWYHFFY
QYNPNAAVWG
DIVWGHAVSR
DLIHWVHLPI
AMVADQWYDS
NGVWTGSATF
LPDGSIVMLY
TGSTDKAVQV
QNLAYPEDPN
DPLLLKWVKF
PGNPVLVPPP
GILPKDFRDP
TTAWKTSEGK
WRITIGSKLN
KTGISLVYDT
IDFKTYEKLD
TLLHRVPNTG
MWECVDFYPV
SKTAGNGLDT
SVNGPDVKHI
VKASMDDTRF
DHYAVGTYFD
SNGTWIPDDP
TIDVGMTASL
RYDYGKFYAS
KSFYDQNKGR
RVLWSWIGES
DSEASDVQKG
WSSLQGIPRT
VVLDTKTGKN
LVQWPVEEIK
SLRLSSKQFD
LEVGPGSVVP
VDVGSAAQLD
IEAEFEINKE
SLDKIIGNAS
VVAEAEEFSC
EKSGGSTVRG
ALGPFGFSVL
ATESLSEQTP
VYFYVAKGKD
SELKTFFCTD
TSRSSVANDV
VKPIYGSVVP
VLKGEKLTMR
ILVDHSIVEA
FGQGGRTCIT
SRVYPTTAIY
GAAKLFLFNN
ALDATVTASF
TVWQMNSAFI
HPYSDEAVRA
LSRT
________________Given the above incorrect annotations, this may, or may not, be the correct sequence for At1g57680.1 _________________ ___________________________ ____________________ ___________ __________ __________________ __________________ _________________ _________________
MAIRKLLLLLKPIDPYPFLQTEGASLIKNPQVLQYLESRCKVHKNAIKFCQEILSKKPVE
WKPISRNDLSHPIRDVDMVITVGGDGTLLHASHFIDDSVPVLGVNSDPTQAHEVEELSDQ
FDASRSTGHLCAATVENFEQVLDDILFGRVVPAKVSRISLKLNSETLLSHALNDILIAQP
CPAAVSRFSFKIKNKDGASSPKTVNCRSSGLRICTAAGSTAAMQSAGGFVMPMLSRDLQF
MVREPISPGSTASLMHSTFKPDQFMDVNWYSDHGTIYIDGCQVQHSVQLGDTIEISSDAP
VLNVFLSHGISQIRSRY-
Multiple sequence alignment[]
A full-length multiple-sequence alignment (MSA) is available here. This MSA may be visualized by submitting it to a server such as ESPript.
Protein structure[]
A predicted structure for this protein is available here.
References[]
- ↑ This is a test reference.